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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817282.1_cds_XP_016499110.1_13067
CDS Infomation

[gene=LOC107817759] [db_xref=GeneID:107817759] [protein=protein PHR1-LIKE 1-like] [protein_id=XP_016499110.1] [location=complement(join(7801..8118,8649..8718,12204..12261,13265..13304,13403..13479,13560..13770,13899..14504))] [gbkey=CDS]
Sequence

ATGGAAGCACGTCCCGCCGTGTCTGTTCAAAGTGTGGTTGCAAGTCAACTCAGTAATTGT
GGTGCATCAGGGGCACTTTCTTCTTCTTTCCCTATGCTTCCAACAGTCCTAGGAGAGAAG
TATCCTTTGTTGCCAGACTTGCAGCAGGCTTCGACGGAAAAGGAACTCAAGCAACATCCT
GGAACTTTTGTTTCTCATTTGCCTTCCAACAGTGGGGCTGTTGGTCTTATGTTTTCATCA
TCATCAGGATTCTCGGCGGATCTTCATTTCTCATCTGTTCCACCCCAAGAAAGTCACTCA
GGACCTGCACCTTTCATTTCTCAGTCAACAAATAGTGAGACATCAATCCTATTACCTCAT
TCTGGAGTTCTTCAATCCACAGCATCTAGCCAATATTTGAACGAAAACAATGAACCCTGG
TGTATAGATCCATTGCCTGATTTCCTTGACTATTCGATGAATACTCCTGTCCAGAATAGT
CAGCTAGCTTGTAGCAATAAACAAAGTGATTGGCAGGAATGGGCGGACCTCGTAATCAAT
GAGGAAGATGCTCTGACTTCTAATTGGAACGAGATCATGGCTGATACAAGCCTTGCCGAG
ACAGAGATGCAAGATCAGGAGGAAAAACAACCTTCAAATTTCCCAATGCAGCAAGTCCAA
ACATCACAGCAAATCCCAGCTGTGGCTGTAGAAAATTCAGCTATTGCTCCTGCATCATCC
CCTGCAAGTGGTGCTGCAACAAAGCAACGCATGCGTTGGACACCAGAACTTCATGAAGCC
TTTGTGGAAGCAGTCAACAAGCTTGGTGGAAGTGAAAGAGCTACTCCCAAAGGTGTGCTA
AAATTGATGAAAGTTGAAGGTTTGACCATCTATCATGTAAAAAGCCACTTGCAGAAATAT
CGAACAGCTAGATATAAACCAGAAGCATCAGAGGAGTCTTCAGAGAAGAAACATTCTTCA
ATTGATGATTTGTCATCTCTGGACTTAAAAACGGGAATTGAGATAACAGAAGCATTGCGA
CTACAGATGGAAGTTCAGAAGCGTCTGCATGAACAGCTTGAGATTCAAAGAAATCTGCAG
CTGCGTATAGAAGAACAAGGGCGATACCTCCAGGAGATGTTTGAGAAGCAGTGCAAGTCA
ATGCCTGGCGTGGACTTGGCTAAAGGCTCATCATCCACAGCAGATGATGCCTTTGCACAA
TTGTCAGATGCCGTTCAAAGTTCCTCCTGCAAAAATGATCCTGGAGTGTCGCAGGTTGAT
ATTTCTAAAGAGGTTGATGAGAAGCAGAAAAAGCGGGAAAAAGAAGTTGGAGAGCCTGAG
ACAAATATAACCAGCACATTTGATTCACCACCTTCAAAGCGCTCTAAATTGGATGAATAA

Peptide Sequence

PEP ID

XP_016499110.1
PEP Infomation

PREDICTED: protein PHR1-LIKE 1-like [Nicotiana tabacum]
Sequence

MEARPAVSVQSVVASQLSNCGASGALSSSFPMLPTVLGEKYPLLPDLQQASTEKELKQHP
GTFVSHLPSNSGAVGLMFSSSSGFSADLHFSSVPPQESHSGPAPFISQSTNSETSILLPH
SGVLQSTASSQYLNENNEPWCIDPLPDFLDYSMNTPVQNSQLACSNKQSDWQEWADLVIN
EEDALTSNWNEIMADTSLAETEMQDQEEKQPSNFPMQQVQTSQQIPAVAVENSAIAPASS
PASGAATKQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKY
RTARYKPEASEESSEKKHSSIDDLSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQ
LRIEEQGRYLQEMFEKQCKSMPGVDLAKGSSSTADDAFAQLSDAVQSSSCKNDPGVSQVD
ISKEVDEKQKKREKEVGEPETNITSTFDSPPSKRSKLDE

Transcript Sequence

Gene sequence data has not been registered.